meierlab.viz: Neuroimaging Visualization Tools

Network Visualizations

get_atlas_coords(atlas_img)	Helper function to generate atlas coordinates if none are provided.
get_subgraph_coords(subgraph, atlas_coords)	Helper function to get plotting coordinates for a subgraph from the full atlas.
plot_connectome_from_graph(g, atlas_coords)	Plot full connectome from a graph g.
plot_subgraph_connectome(subgraph, atlas_coords)	Plot the connectome for a subgraph, e.g. plot only one subnetwork.
plot_subgraph_nodes(subgraph, atlas_coords)	Plot the nodes of a subgraph.

Outlier Visualization

gen_figs(outlier_df, x_cols[, y_cols])	Generate plotly figures from an outlier dataframe.
get_app(figures[, app_type])	Get a dash app to view data.